An issue has been found in HTSlib 1.8. It is a buffer over-read in sam_parse1 in sam.c.
{ "availability": "Available with Ubuntu Pro (Infra-only): https://ubuntu.com/pro", "ubuntu_priority": "medium", "binaries": [ { "binary_version": "0.2.0~rc3-1ubuntu0.1~esm1", "binary_name": "htslib-test" }, { "binary_version": "0.2.0~rc3-1ubuntu0.1~esm1", "binary_name": "libhts-dev" }, { "binary_version": "0.2.0~rc3-1ubuntu0.1~esm1", "binary_name": "libhts0" }, { "binary_version": "0.2.0~rc3-1ubuntu0.1~esm1", "binary_name": "libhts0-dbgsym" } ] }
{ "availability": "Available with Ubuntu Pro: https://ubuntu.com/pro", "ubuntu_priority": "medium", "binaries": [ { "binary_version": "1.2.1-2ubuntu1+esm1", "binary_name": "htslib-test" }, { "binary_version": "1.2.1-2ubuntu1+esm1", "binary_name": "libhts-dev" }, { "binary_version": "1.2.1-2ubuntu1+esm1", "binary_name": "libhts1" }, { "binary_version": "1.2.1-2ubuntu1+esm1", "binary_name": "libhts1-dbgsym" }, { "binary_version": "1.2.1-2ubuntu1+esm1", "binary_name": "tabix" }, { "binary_version": "1.2.1-2ubuntu1+esm1", "binary_name": "tabix-dbgsym" } ] }
{ "availability": "Available with Ubuntu Pro: https://ubuntu.com/pro", "ubuntu_priority": "medium", "binaries": [ { "binary_version": "1.7-2ubuntu0.1~esm1", "binary_name": "htslib-test" }, { "binary_version": "1.7-2ubuntu0.1~esm1", "binary_name": "libhts-dev" }, { "binary_version": "1.7-2ubuntu0.1~esm1", "binary_name": "libhts-private-dev" }, { "binary_version": "1.7-2ubuntu0.1~esm1", "binary_name": "libhts2" }, { "binary_version": "1.7-2ubuntu0.1~esm1", "binary_name": "libhts2-dbgsym" }, { "binary_version": "1.7-2ubuntu0.1~esm1", "binary_name": "tabix" }, { "binary_version": "1.7-2ubuntu0.1~esm1", "binary_name": "tabix-dbgsym" } ] }